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    TET16 tetraspanin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838432, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TET16
    Official Full Name
    tetraspanin
    Primary source
    TAIR:AT1G18510
    Locus tag
    AT1G18510
    See related
    Araport:AT1G18510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15H18.2; F15H18_2; tetraspanin 16
    Summary
    Member of TETRASPANIN family
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    Genomic context

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    See TET16 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (6373265..6374090)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637) Neighboring gene methylthioalkylmalate synthase-like 4 Neighboring gene tetraspanin11 Neighboring gene EF hand calcium-binding protein family Neighboring gene Ribosomal protein L6 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101709.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in auxin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    tetraspanin
    NP_173286.2
    • tetraspanin 16 (TET16); BEST Arabidopsis thaliana protein match is: tetraspanin 17 (TAIR:AT1G74045.1); Has 136 Blast hits to 136 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6373265..6374090
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101709.2 → NP_173286.2  tetraspanin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IC96, Q5BQ04, Q5Q0G5, Q9LPR5
      UniProtKB/TrEMBL
      A0A5S9V1R6, A0A654EC07
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5BQ04.1

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