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    CYCA3;2 cyclin-dependent protein kinase 3;2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841124, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYCA3;2
    Official Full Name
    cyclin-dependent protein kinase 3;2
    Primary source
    TAIR:AT1G47210
    Locus tag
    AT1G47210
    See related
    Araport:AT1G47210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cyclin-dependent protein kinase 3;2; F8G22.8; F8G22_8
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    Genomic context

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    See CYCA3;2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (17300691..17302914)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene WPP domain protein 2 Neighboring gene Cyclin A3;3 Neighboring gene CYCLIN A3;4 Neighboring gene NRAMP metal ion transporter 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Two Arabidopsis cyclin A3s possess G1 cyclin-like features. Takahashi I, et al. Plant Cell Rep, 2010 Apr. PMID 20130883
    2. Functional modules in the Arabidopsis core cell cycle binary protein-protein interaction network. Boruc J, et al. Plant Cell, 2010 Apr. PMID 20407024, Free PMC Article
    3. High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Koroleva OA, et al. Plant J, 2005 Jan. PMID 15610358
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103614.5
    NM_103615.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitotic cell cycle phase transition IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    cyclin-dependent protein kinase 3;2
    NP_564499.3
    • cyclin-dependent protein kinase 3;2 (CYCA3;2); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A3;4 (TAIR:AT1G47230.1); Has 4323 Blast hits to 4316 proteins in 367 species: Archae - 0; Bacteria - 0; Metazoa - 1987; Fungi - 532; Plants - 1111; Viruses - 34; Other Eukaryotes - 659 (source: NCBI BLink).
    NP_564500.1
    • cyclin-dependent protein kinase 3;2 (CYCA3;2); CONTAINS InterPro DOMAIN/s: G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: Cyclin A3;1 (TAIR:AT5G43080.1); Has 3166 Blast hits to 3165 proteins in 336 species: Archae - 0; Bacteria - 0; Metazoa - 1525; Fungi - 500; Plants - 703; Viruses - 27; Other Eukaryotes - 411 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17300691..17302914
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103614.5 → NP_564499.3  cyclin-dependent protein kinase 3;2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564499.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C625, Q9C6A9
      UniProtKB/TrEMBL
      A0A178WIN4, A0A5S9WJP9
      Conserved Domains (2) summary
      cd20506
      Location:236 → 350
      CYCLIN_AtCycA-like_rpt2; second cyclin box found in Arabidopsis thaliana A-type cyclins (CycAs) and similar proteins
      cd20562
      Location:95 → 232
      CYCLIN_AtCycA_like_rpt1; first cyclin box found in Arabidopsis thaliana A-type cyclins (CycAs) and similar proteins

    2. NM_103615.1 → NP_564500.1  cyclin-dependent protein kinase 3;2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564500.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HT55
      Conserved Domains (1) summary
      pfam00134
      Location:105 → 192
      Cyclin_N; Cyclin, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C6A9.1

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