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    Acid phosphatase/vanadium-dependent haloperoxidase-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843081, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    Primary source
    TAIR:AT1G67600
    Locus tag
    AT1G67600
    See related
    Araport:AT1G67600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12A21.27; F12A21_27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (25336235..25337747, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene zinc finger CONSTANS-like protein (DUF3537) Neighboring gene Protein kinase superfamily protein Neighboring gene Remorin family protein Neighboring gene ncRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_105427.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    NP_176927.1
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G24350.1); Has 1114 Blast hits to 1114 proteins in 408 species: Archae - 0; Bacteria - 729; Metazoa - 0; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25336235..25337747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105427.4 → NP_176927.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176927.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WDD4, Q9CAG0, Q9FXC5
      Conserved Domains (1) summary
      pfam02681
      Location:16 → 151
      DUF212; Divergent PAP2 family
    Nucleotide Protein
    Heading Accession and Version

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