U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MYB106 myb domain protein 106 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821209, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MYB106
    Official Full Name
    myb domain protein 106
    Primary source
    TAIR:AT3G01140
    Locus tag
    AT3G01140
    See related
    Araport:AT3G01140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMYB106; myb domain protein 106; NOECK; NOK; T4P13.17; T4P13_17
    Summary
    Encodes a MIXTA-like MYB gene NOECK (NOK). Loss of function mutations show an increased number of branchpoints in leaf trichomes suggesting a role in negative regulation of trichome branching.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MYB106 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (46330..48296, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene ATP synthase E chain Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene polypyrimidine tract-binding protein 1 Neighboring gene pre-rRNA-processing ESF1-like protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Analysis of purified glabra3-shapeshifter trichomes reveals a role for NOECK in regulating early trichome morphogenic events. Gilding EK, et al. Plant J, 2010 Oct. PMID 21070410
    2. Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. Jakoby MJ, et al. Plant Physiol, 2008 Nov. PMID 18805951, Free PMC Article
    3. Arabidopsis thaliana TCP15 interacts with the MIXTA-like transcription factor MYB106/NOECK. Camoirano A, et al. Plant Signal Behav, 2021 Oct 3. PMID 34107838, Free PMC Article
    4. MIXTA-like transcription factors and WAX INDUCER1/SHINE1 coordinately regulate cuticle development in Arabidopsis and Torenia fournieri. Oshima Y, et al. Plant Cell, 2013 May. PMID 23709630, Free PMC Article
    5. Genetic control of trichome branch number in Arabidopsis: the roles of the FURCA loci. Luo D, et al. Development, 1999 Dec. PMID 10572032

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabidopsis thaliana TCP15 interacts with the MIXTA-like transcription factor MYB106/NOECK.
      Title: Arabidopsis thaliana TCP15 interacts with the MIXTA-like transcription factor MYB106/NOECK.
    2. Data indicate that the MIXTA-like MYB transcription factors MYB106 and MYB16, which regulate epidermal cell morphology, also regulate cuticle development coordinately with WIN1/SHN1.
      Title: MIXTA-like transcription factors and WAX INDUCER1/SHINE1 coordinately regulate cuticle development in Arabidopsis and Torenia fournieri.
    3. roles in both promoting and limiting trichome development
      Title: Analysis of purified glabra3-shapeshifter trichomes reveals a role for NOECK in regulating early trichome morphogenic events.
    4. combination of transcript profiling and map-based cloning revealed that the NOECK gene of Arabidopsis encodes AtMYB106, a MIXTA-like transcription factor and homolog of cotton GhMYB25
      Title: Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    NM_110979.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cuticle pattern formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of cutin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within trichome branching IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in trichome branching IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    myb domain protein 106
    NP_186763.2
    • myb domain protein 106 (MYB106); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: trichome branching, regulation of transcription, DNA-dependent; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 16 (TAIR:AT5G15310.1); Has 8850 Blast hits to 8247 proteins in 477 species: Archae - 0; Bacteria - 0; Metazoa - 708; Fungi - 505; Plants - 5831; Viruses - 3; Other Eukaryotes - 1803 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      46330..48296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337322.1 → NP_001326423.1  myb domain protein 106 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6R098, Q9LE63
      UniProtKB/TrEMBL
      A0A178VAI2
      Conserved Domains (1) summary
      cl28544
      Location:1 → 221
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

    2. NM_110979.2 → NP_186763.2  myb domain protein 106 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186763.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAI2, F4J2A8
      Conserved Domains (2) summary
      smart00717
      Location:110 → 157
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam00249
      Location:57 → 104
      Myb_DNA-binding; Myb-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LE63.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.