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    Pollen Ole e 1 allergen and extensin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820918, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pollen Ole e 1 allergen and extensin family protein
    Primary source
    TAIR:AT3G16660
    Locus tag
    AT3G16660
    See related
    Araport:AT3G16660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (5676749..5678099)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene translationally controlled tumor protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Pollen Ole e 1 allergen and extensin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_112539.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pollen Ole e 1 allergen and extensin family protein
    NP_188288.2
    • Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G16670.1); Has 273 Blast hits to 210 proteins in 63 species: Archae - 0; Bacteria - 149; Metazoa - 42; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5676749..5678099
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338248.1 → NP_001326202.1  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9LUR8

    2. NM_112539.4 → NP_188288.2  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188288.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V858, A0A384LLD4, A0A7G2EQT8, Q8GYY6
      Conserved Domains (1) summary
      pfam01190
      Location:65 → 142
      Pollen_Ole_e_I; Pollen proteins Ole e I like
    Nucleotide Protein
    Heading Accession and Version

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