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    uveal autoantigen with coiled-coil/ankyrin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827259, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uveal autoantigen with coiled-coil/ankyrin
    Primary source
    TAIR:AT4G15790
    Locus tag
    AT4G15790
    See related
    Araport:AT4G15790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3935W; FCAALL.69
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (8982183..8984344)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Lys Neighboring gene vesicle-associated membrane protein 724 Neighboring gene ralf-like 33 Neighboring gene ncRNA Neighboring gene heat shock factor binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001341075.1
    NM_117670.9

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uveal autoantigen with coiled-coil/ankyrin
    NP_567475.5
    • unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8982183..8984344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117670.9 → NP_567475.5  uveal autoantigen with coiled-coil/ankyrin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567475.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXU6, A0A5S9XSR9, Q8LD42, Q8VYF2
      Conserved Domains (1) summary
      COG1196
      Location:31 → 146
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001341075.1 → NP_001328180.1  uveal autoantigen with coiled-coil/ankyrin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B3W0
    Nucleotide Protein
    Heading Accession and Version

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