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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001105192.3 → NP_001098662.1 transducin-like enhancer protein 3 isoform b
See identical proteins and their annotated locations for NP_001098662.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a.
- Source sequence(s)
-
AB046767, AC026583, AC068327, AK315058, BC043247, BM676381
- Consensus CDS
-
CCDS45294.1
- UniProtKB/TrEMBL
-
Q6PRX3
- Related
- ENSP00000394717.3, ENST00000451782.7
- Conserved Domains (3) summary
-
- cd00200
Location:481 → 766
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:486 → 525
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_001282979.2 → NP_001269908.1 transducin-like enhancer protein 3 isoform e
See identical proteins and their annotated locations for NP_001269908.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses two alternate in-frame splice sites in the 3' coding region compared to variant 1. The encoded isoform (e) is shorter than isoform a.
- Source sequence(s)
-
AB046767, AC026583, AC068327, AY583459, BC043247, BM676381, M99438
- Consensus CDS
-
CCDS61692.1
- UniProtKB/TrEMBL
-
Q6PRX3
- Related
- ENSP00000453083.1, ENST00000557997.5
- Conserved Domains (3) summary
-
- cd00200
Location:476 → 761
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:481 → 520
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_001282980.2 → NP_001269909.1 transducin-like enhancer protein 3 isoform d
See identical proteins and their annotated locations for NP_001269909.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. The encoded isoform (d) is shorter than isoform a.
- Source sequence(s)
-
AB046767, AC026583, AC068327, BC043247, BM676381
- Consensus CDS
-
CCDS61691.1
- UniProtKB/TrEMBL
-
Q6PRX2
- Related
- ENSP00000453435.1, ENST00000558379.5
- Conserved Domains (3) summary
-
- cd00200
Location:479 → 764
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:484 → 523
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_001282981.2 → NP_001269910.1 transducin-like enhancer protein 3 isoform f
See identical proteins and their annotated locations for NP_001269910.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) has multiple differences compared to variant 1. These differences result in a novel 5' coding region and 5' UTR compared to variant 1. The encoded isoform (f) is shorter than isoform a.
- Source sequence(s)
-
AB046767, AC068327, AK298482, BM676381, BP373048
- Consensus CDS
-
CCDS61689.1
- UniProtKB/TrEMBL
-
H0YKT5
- Related
- ENSP00000415057.3, ENST00000440567.7
- Conserved Domains (3) summary
-
- cd00200
Location:474 → 759
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:479 → 518
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:2 → 126
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_001282982.2 → NP_001269911.1 transducin-like enhancer protein 3 isoform g
See identical proteins and their annotated locations for NP_001269911.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) represents the use of an alternate promoter and has multiple differences compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at a downstream start codon compared to variant 1. The encoded isoform (g) is shorter than isoform a.
- Source sequence(s)
-
AB046767, AC026583, AC068327, AK096779, BM676381
- UniProtKB/TrEMBL
-
B3KUA2
- Conserved Domains (3) summary
-
- cd00200
Location:411 → 696
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:416 → 455
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:1 → 77
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_005078.4 → NP_005069.2 transducin-like enhancer protein 3 isoform a
See identical proteins and their annotated locations for NP_005069.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AB046767, AC026583, AC068327, BC043247, BM676381, M99438
- Consensus CDS
-
CCDS45293.1
- UniProtKB/Swiss-Prot
- B4DPT0, E9PD64, F8W964, Q04726, Q6PI57, Q8IVV6, Q8WVR2, Q9HCM5
- UniProtKB/TrEMBL
-
Q6PRX2
- Related
- ENSP00000452871.1, ENST00000558939.5
- Conserved Domains (3) summary
-
- cd00200
Location:484 → 769
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:489 → 528
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
NM_020908.3 → NP_065959.1 transducin-like enhancer protein 3 isoform c
See identical proteins and their annotated locations for NP_065959.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AB046767, AC026583, AC068327, BC043247, BM676381
- Consensus CDS
-
CCDS58375.1
- UniProtKB/TrEMBL
-
Q6PRX2
- Related
- ENSP00000319233.8, ENST00000317509.12
- Conserved Domains (4) summary
-
- cd00200
Location:472 → 757
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:251 → 460
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:477 → 516
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000015.10 Reference GRCh38.p14 Primary Assembly
- Range
-
70047790..70097917 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047432993.1 → XP_047288949.1 transducin-like enhancer protein 3 isoform X14
- UniProtKB/TrEMBL
-
Q6PRX3
-
XM_047432992.1 → XP_047288948.1 transducin-like enhancer protein 3 isoform X12
- UniProtKB/TrEMBL
-
Q6PRX3
-
XM_011521983.4 → XP_011520285.1 transducin-like enhancer protein 3 isoform X13
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (4) summary
-
- COG2319
Location:406 → 691
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:405 → 690
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam03920
Location:1 → 124
- TLE_N; Groucho/TLE N-terminal Q-rich domain
- sd00039
Location:410 → 449
- 7WD40; WD40 repeat [structural motif]
-
XM_011521982.4 → XP_011520284.1 transducin-like enhancer protein 3 isoform X11
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (4) summary
-
- COG2319
Location:411 → 696
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:410 → 695
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam03920
Location:1 → 124
- TLE_N; Groucho/TLE N-terminal Q-rich domain
- sd00039
Location:415 → 454
- 7WD40; WD40 repeat [structural motif]
-
XM_006720665.5 → XP_006720728.1 transducin-like enhancer protein 3 isoform X16
- UniProtKB/TrEMBL
-
Q6PRX3
- Conserved Domains (3) summary
-
- cd00200
Location:475 → 760
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:480 → 519
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 132
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_011521980.4 → XP_011520282.1 transducin-like enhancer protein 3 isoform X7
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (3) summary
-
- cd00200
Location:483 → 768
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:488 → 527
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 132
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_005254633.4 → XP_005254690.1 transducin-like enhancer protein 3 isoform X17
See identical proteins and their annotated locations for XP_005254690.1
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (3) summary
-
- cd00200
Location:467 → 752
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:472 → 511
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 133
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_011521977.4 → XP_011520279.1 transducin-like enhancer protein 3 isoform X2
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (3) summary
-
- cd00200
Location:493 → 778
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:498 → 537
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 142
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_005254628.5 → XP_005254685.1 transducin-like enhancer protein 3 isoform X10
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (3) summary
-
- cd00200
Location:477 → 762
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:482 → 521
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_005254625.5 → XP_005254682.1 transducin-like enhancer protein 3 isoform X8
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (4) summary
-
- cd00200
Location:482 → 767
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam05109
Location:261 → 470
- Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
- sd00039
Location:487 → 526
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_005254623.5 → XP_005254680.1 transducin-like enhancer protein 3 isoform X5
- UniProtKB/TrEMBL
-
Q6PRX3
- Conserved Domains (3) summary
-
- cd00200
Location:486 → 771
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:491 → 530
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_005254622.6 → XP_005254679.1 transducin-like enhancer protein 3 isoform X3
- UniProtKB/TrEMBL
-
Q6PRX3
- Conserved Domains (3) summary
-
- cd00200
Location:491 → 776
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:496 → 535
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_011521978.4 → XP_011520280.1 transducin-like enhancer protein 3 isoform X4
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (3) summary
-
- cd00200
Location:489 → 774
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:494 → 533
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_011521976.4 → XP_011520278.1 transducin-like enhancer protein 3 isoform X1
See identical proteins and their annotated locations for XP_011520278.1
- UniProtKB/TrEMBL
- H0YL70, Q6PRX2
- Related
- ENSP00000453081.1, ENST00000559929.5
- Conserved Domains (3) summary
-
- cd00200
Location:494 → 779
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:499 → 538
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:9 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_011521979.4 → XP_011520281.1 transducin-like enhancer protein 3 isoform X6
See identical proteins and their annotated locations for XP_011520281.1
- UniProtKB/TrEMBL
-
H0YNT2
- Related
- ENSP00000453760.1, ENST00000559048.5
- Conserved Domains (3) summary
-
- cd00200
Location:422 → 707
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:427 → 466
- 7WD40; WD40 repeat [structural motif]
- pfam03920
Location:1 → 76
- TLE_N; Groucho/TLE N-terminal Q-rich domain
-
XM_011521981.3 → XP_011520283.1 transducin-like enhancer protein 3 isoform X9
- UniProtKB/TrEMBL
-
Q6PRX2
- Conserved Domains (4) summary
-
- COG2319
Location:488 → 747
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:494 → 738
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam03920
Location:1 → 143
- TLE_N; Groucho/TLE N-terminal Q-rich domain
- sd00039
Location:499 → 538
- 7WD40; WD40 repeat [structural motif]
-
XM_017022532.3 → XP_016878021.1 transducin-like enhancer protein 3 isoform X15
- UniProtKB/TrEMBL
-
H0YLI3
- Related
- ENSP00000453373.1, ENST00000561453.5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060939.1 Alternate T2T-CHM13v2.0
- Range
-
67870017..67920141 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054378731.1 → XP_054234706.1 transducin-like enhancer protein 3 isoform X14
- UniProtKB/TrEMBL
-
Q6PRX3
-
XM_054378729.1 → XP_054234704.1 transducin-like enhancer protein 3 isoform X12
- UniProtKB/TrEMBL
-
Q6PRX3
-
XM_054378730.1 → XP_054234705.1 transducin-like enhancer protein 3 isoform X13
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378728.1 → XP_054234703.1 transducin-like enhancer protein 3 isoform X11
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378733.1 → XP_054234708.1 transducin-like enhancer protein 3 isoform X16
- UniProtKB/TrEMBL
-
Q6PRX3
-
XM_054378724.1 → XP_054234699.1 transducin-like enhancer protein 3 isoform X7
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378734.1 → XP_054234709.1 transducin-like enhancer protein 3 isoform X17
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378719.1 → XP_054234694.1 transducin-like enhancer protein 3 isoform X2
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378727.1 → XP_054234702.1 transducin-like enhancer protein 3 isoform X10
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378725.1 → XP_054234700.1 transducin-like enhancer protein 3 isoform X8
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378722.1 → XP_054234697.1 transducin-like enhancer protein 3 isoform X5
- UniProtKB/TrEMBL
-
Q6PRX3
-
XM_054378720.1 → XP_054234695.1 transducin-like enhancer protein 3 isoform X3
- UniProtKB/TrEMBL
-
Q6PRX3
-
XM_054378721.1 → XP_054234696.1 transducin-like enhancer protein 3 isoform X4
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378718.1 → XP_054234693.1 transducin-like enhancer protein 3 isoform X1
- UniProtKB/TrEMBL
- H0YL70, Q6PRX2
-
XM_054378723.1 → XP_054234698.1 transducin-like enhancer protein 3 isoform X6
- UniProtKB/TrEMBL
-
H0YNT2
-
XM_054378726.1 → XP_054234701.1 transducin-like enhancer protein 3 isoform X9
- UniProtKB/TrEMBL
-
Q6PRX2
-
XM_054378732.1 → XP_054234707.1 transducin-like enhancer protein 3 isoform X15
- UniProtKB/TrEMBL
-
H0YLI3