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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001272087.2 → NP_001259016.1 excitatory amino acid transporter 4 isoform 1
See identical proteins and their annotated locations for NP_001259016.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 3 encode the same isoform (1).
- Source sequence(s)
-
AC004659, BC028721, BC040604, BI829415, DA059558
- Consensus CDS
-
CCDS62578.1
- UniProtKB/Swiss-Prot
-
P48664
- Related
- ENSP00000471781.1, ENST00000598504.5
- Conserved Domains (1) summary
-
- cl00573
Location:58 → 312
- SDF; Sodium:dicarboxylate symporter family
-
NM_001272088.2 → NP_001259017.1 excitatory amino acid transporter 4 isoform 1
See identical proteins and their annotated locations for NP_001259017.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1 and 3 encode the same isoform (1).
- Source sequence(s)
-
AC004659, BC028721, DA059558, DR004792
- Consensus CDS
-
CCDS62578.1
- UniProtKB/Swiss-Prot
-
P48664
- Related
- ENSP00000446175.1, ENST00000544886.6
- Conserved Domains (1) summary
-
- cl00573
Location:58 → 312
- SDF; Sodium:dicarboxylate symporter family
-
NM_001384669.1 → NP_001371598.1 excitatory amino acid transporter 4 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC004659
- Consensus CDS
-
CCDS12321.1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063
- Related
- ENSP00000221742.3, ENST00000221742.7
- Conserved Domains (1) summary
-
- pfam00375
Location:58 → 522
- SDF; Sodium:dicarboxylate symporter family
-
NM_001384670.1 → NP_001371599.1 excitatory amino acid transporter 4 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC004659
- Consensus CDS
-
CCDS62578.1
- Conserved Domains (1) summary
-
- cl00573
Location:58 → 312
- SDF; Sodium:dicarboxylate symporter family
-
NM_001384671.1 → NP_001371600.1 excitatory amino acid transporter 4 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC004659
- Conserved Domains (1) summary
-
- cl00573
Location:58 → 117
- SDF; Sodium:dicarboxylate symporter family
-
NM_005071.3 → NP_005062.1 excitatory amino acid transporter 4 isoform 2
See identical proteins and their annotated locations for NP_005062.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and its transcription extends past a splice site that is used in variant 1, resulting in a novel 3' coding region and 3' UTR compared to variant 1. It encodes isoform 2 which is longer and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC004659
- Consensus CDS
-
CCDS12321.1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063
- Related
- ENSP00000472133.2, ENST00000594383.2
- Conserved Domains (1) summary
-
- pfam00375
Location:58 → 522
- SDF; Sodium:dicarboxylate symporter family
RNA
-
NR_073589.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate 5' and 3' exon structure, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK302380, DA200776, DB027852, HY352099, U18244
- Related
-
ENST00000430939.6
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
14950033..15010643 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047439234.1 → XP_047295190.1 excitatory amino acid transporter 4 isoform X1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063
- Related
- ENSP00000471038.1, ENST00000600144.5
-
XM_047439233.1 → XP_047295189.1 excitatory amino acid transporter 4 isoform X1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063
-
XM_017027152.3 → XP_016882641.1 excitatory amino acid transporter 4 isoform X1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063
- Conserved Domains (1) summary
-
- pfam00375
Location:58 → 522
- SDF; Sodium:dicarboxylate symporter family
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
15074841..15135544 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054321792.1 → XP_054177767.1 excitatory amino acid transporter 4 isoform X1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063
-
XM_054321791.1 → XP_054177766.1 excitatory amino acid transporter 4 isoform X1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063
-
XM_054321790.1 → XP_054177765.1 excitatory amino acid transporter 4 isoform X1
- UniProtKB/Swiss-Prot
- P48664, Q8N753
- UniProtKB/TrEMBL
-
M0R063