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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001297774.2 → NP_001284703.1 synaptotagmin-5 isoform 2
See identical proteins and their annotated locations for NP_001284703.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and contains multiple coding region differences, compared to variant 1. It encodes isoform 2, which is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC010327, AK295337, BM311004
- Consensus CDS
-
CCDS74455.1
- UniProtKB/Swiss-Prot
-
O00445
- Related
- ENSP00000465576.1, ENST00000590851.5
- Conserved Domains (2) summary
-
- cd08385
Location:106 → 228
- C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
- cl14603
Location:236 → 370
- C2; C2 domain
-
NM_003180.3 → NP_003171.2 synaptotagmin-5 isoform 1
See identical proteins and their annotated locations for NP_003171.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC010327, BC046157, BQ417474, DA529870
- Consensus CDS
-
CCDS12919.1
- UniProtKB/Swiss-Prot
- B3KWJ8, B7Z300, O00445, Q86X72
- UniProtKB/TrEMBL
-
Q05BS5
- Related
- ENSP00000346265.2, ENST00000354308.8
- Conserved Domains (2) summary
-
- cd08385
Location:109 → 231
- C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
- cl14603
Location:240 → 374
- C2; C2 domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
55171196..55180289 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047439257.1 → XP_047295213.1 synaptotagmin-5 isoform X2
- UniProtKB/TrEMBL
- Q05BS5, Q4FD32
-
XM_017027175.2 → XP_016882664.1 synaptotagmin-5 isoform X1
- UniProtKB/Swiss-Prot
- B3KWJ8, B7Z300, O00445, Q86X72
- UniProtKB/TrEMBL
-
Q05BS5
- Conserved Domains (2) summary
-
- cd08385
Location:109 → 231
- C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
- cl14603
Location:240 → 374
- C2; C2 domain
-
XM_047439256.1 → XP_047295212.1 synaptotagmin-5 isoform X1
- UniProtKB/Swiss-Prot
- B3KWJ8, B7Z300, O00445, Q86X72
- UniProtKB/TrEMBL
-
Q05BS5
-
XM_006723339.4 → XP_006723402.1 synaptotagmin-5 isoform X1
See identical proteins and their annotated locations for XP_006723402.1
- UniProtKB/Swiss-Prot
- B3KWJ8, B7Z300, O00445, Q86X72
- UniProtKB/TrEMBL
-
Q05BS5
- Related
- ENSP00000442896.1, ENST00000537500.5
- Conserved Domains (2) summary
-
- cd08385
Location:109 → 231
- C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
- cl14603
Location:240 → 374
- C2; C2 domain
-
XM_006723341.4 → XP_006723404.1 synaptotagmin-5 isoform X3
- Conserved Domains (2) summary
-
- cd08385
Location:106 → 228
- C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
- cl14603
Location:237 → 371
- C2; C2 domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
58265259..58274351 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054321845.1 → XP_054177820.1 synaptotagmin-5 isoform X1
- UniProtKB/Swiss-Prot
- B3KWJ8, B7Z300, O00445, Q86X72
- UniProtKB/TrEMBL
-
Q05BS5
-
XM_054321847.1 → XP_054177822.1 synaptotagmin-5 isoform X1
- UniProtKB/Swiss-Prot
- B3KWJ8, B7Z300, O00445, Q86X72
- UniProtKB/TrEMBL
-
Q05BS5
-
XM_054321846.1 → XP_054177821.1 synaptotagmin-5 isoform X1
- UniProtKB/Swiss-Prot
- B3KWJ8, B7Z300, O00445, Q86X72
- UniProtKB/TrEMBL
-
Q05BS5
-
XM_054321849.1 → XP_054177824.1 synaptotagmin-5 isoform X3
-
XM_054321848.1 → XP_054177823.1 synaptotagmin-5 isoform X2
- UniProtKB/TrEMBL
- Q05BS5, Q4FD32