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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_052845.1 RefSeqGene
- Range
-
4989..28884
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_005961.3 → NP_005952.2 mucin-6 precursor
See identical proteins and their annotated locations for NP_005952.2
Status: REVIEWED
- Source sequence(s)
-
AC139749
- Consensus CDS
-
CCDS44513.1
- UniProtKB/Swiss-Prot
- O15329, Q14394, Q2TUQ5, Q4L207, Q6W4X9, Q8N8I1, Q8NAK1
- Related
- ENSP00000406861.2, ENST00000421673.7
- Conserved Domains (8) summary
-
- PHA03255
Location:2188 → 2343
- PHA03255; BDLF3; Provisional
- smart00041
Location:2351 → 2434
- CT; C-terminal cystine knot-like domain (CTCK)
- smart00215
Location:359 → 403
- VWC_out; von Willebrand factor (vWF) type C domain
- smart00216
Location:386 → 549
- VWD; von Willebrand factor (vWF) type D domain
- pfam00094
Location:868 → 1017
- VWD; von Willebrand factor type D domain
- pfam01826
Location:302 → 357
- TIL; Trypsin Inhibitor like cysteine rich domain
- pfam08742
Location:1057 → 1127
- C8; C8 domain
- cl17735
Location:829 → 886
- VWC; von Willebrand factor type C domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
1012823..1036718 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 PATCHES
Genomic
-
NW_015148966.2 Reference GRCh38.p14 PATCHES
- Range
-
278..33471 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054331976.1 → XP_054187951.1 mucin-6 isoform X1
- UniProtKB/TrEMBL
-
A0A3Q8TMU7
-
XM_054331977.1 → XP_054187952.1 mucin-6 isoform X2
Reference GRCh38.p14 ALT_REF_LOCI_2
Genomic
-
NT_187656.1 Reference GRCh38.p14 ALT_REF_LOCI_2
- Range
-
75566..106295 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054329983.1 → XP_054185958.1 mucin-6 isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_3
Genomic
-
NT_187681.1 Reference GRCh38.p14 ALT_REF_LOCI_3
- Range
-
82414..111124 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054330448.1 → XP_054186423.1 mucin-6 isoform X4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
1071738..1106614 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054368850.1 → XP_054224825.1 mucin-6 isoform X5
- UniProtKB/TrEMBL
-
A0A3Q8TMU7
-
XM_054368851.1 → XP_054224826.1 mucin-6 isoform X6