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    Sprr2a2 small proline-rich protein 2A2 [ Mus musculus (house mouse) ]

    Gene ID: 100303744, updated on 9-Dec-2024

    Summary

    Official Symbol
    Sprr2a2provided by MGI
    Official Full Name
    small proline-rich protein 2A2provided by MGI
    Primary source
    MGI:MGI:3845026
    See related
    Ensembl:ENSMUSG00000068893 AllianceGenome:MGI:3845026
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sprr2a; Sprr2a1; Sprr2a3
    Summary
    Is expressed in stomach and thymus primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in stomach adult (RPKM 5151.3), small intestine adult (RPKM 3157.6) and 4 other tissues See more
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    Genomic context

    See Sprr2a2 in Genome Data Viewer
    Location:
    3 F1; 3 40.14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92157982..92164610)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92250647..92257304)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene small proline-rich protein 2A1 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92037047-92037348 Neighboring gene ribosomal protein L3 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr3:92045650-92045950 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92069949-92070249 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92070431-92070732 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92071949-92072250 Neighboring gene ribosomal protein L3 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr3:92074536-92074836 Neighboring gene STARR-positive B cell enhancer mm9_chr3:92080442-92080742 Neighboring gene small proline-rich protein 2A3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Clone Names

    • MGC19134

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    small proline-rich protein 2A1
    Names
    Small proline-rich protein 2A1
    Small proline-rich protein 2A3
    small proline-rich protein 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164787.2NP_001158259.1  small proline-rich protein 2A1

      See identical proteins and their annotated locations for NP_001158259.1

      Status: VALIDATED

      Source sequence(s)
      AC129296
      Consensus CDS
      CCDS50975.1
      UniProtKB/Swiss-Prot
      O70553, Q4KL71, Q9CQK8
      Related
      ENSMUSP00000102950.2, ENSMUST00000071805.4
      Conserved Domains (1) summary
      pfam14820
      Location:283
      SPRR2; Small proline-rich 2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      92157982..92164610
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)