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    Gm15104 predicted gene 15104 [ Mus musculus (house mouse) ]

    Gene ID: 333588, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Gm15104provided by MGI
    Official Full Name
    predicted gene 15104provided by MGI
    Primary source
    MGI:MGI:3705199
    See related
    Ensembl:ENSMUSG00000087360 AllianceGenome:MGI:3705199
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 14.2) See more
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    Genomic context

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    See Gm15104 in Genome Data Viewer
    Location:
    X F3; X 68.46 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (149094920..149120743, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (150311924..150336719, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 20153 Neighboring gene Bmi1 polycomb ring finger oncogene pseudogene Neighboring gene methylphosphate capping enzyme pseudogene Neighboring gene VCP nuclear cofactor family member 2 Neighboring gene zinc finger CCCH type containing 14 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chrX:146893310-146893611

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC333588

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101501.2 → NP_001094971.1  uncharacterized protein LOC333588

      See identical proteins and their annotated locations for NP_001094971.1

      Status: VALIDATED

      Source sequence(s)
      AL844156
      Related
      ENSMUST00000132626.3
      Conserved Domains (1) summary
      pfam15549
      Location:3 → 98
      PGC7_Stella; PGC7/Stella/Dppa3 domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      149094920..149120743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006528882.4 → XP_006528945.1  uncharacterized protein LOC333588 isoform X1

      See identical proteins and their annotated locations for XP_006528945.1

      Conserved Domains (1) summary
      pfam15549
      Location:3 → 98
      PGC7_Stella; PGC7/Stella/Dppa3 domain

    2. XM_006528881.4 → XP_006528944.1  uncharacterized protein LOC333588 isoform X1

      See identical proteins and their annotated locations for XP_006528944.1

      Conserved Domains (1) summary
      pfam15549
      Location:3 → 98
      PGC7_Stella; PGC7/Stella/Dppa3 domain
    Nucleotide Protein Strain
    Heading Accession and Version

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