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    Gm34289 predicted gene, 34289 [ Mus musculus (house mouse) ]

    Gene ID: 102637497, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm34289provided by MGI
    Official Full Name
    predicted gene, 34289provided by MGI
    Primary source
    MGI:MGI:5593448
    See related
    AllianceGenome:MGI:5593448
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in large intestine adult (RPKM 3.0), small intestine adult (RPKM 1.3) and 2 other tissues See more
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    Genomic context

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    See Gm34289 in Genome Data Viewer
    Location:
    4 A5; 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (40872419..40900371)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (40872419..40900371)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_09993 Neighboring gene presenilin enhancer gamma secretase subunit, pseudogene Neighboring gene predicted gene, 34213 Neighboring gene UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 Neighboring gene STARR-seq mESC enhancer starr_09997 Neighboring gene STARR-positive B cell enhancer ABC_E11234 Neighboring gene STARR-positive B cell enhancer mm9_chr4:40801010-40801311 Neighboring gene microRNA 5123 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:40822974-40823216 Neighboring gene STARR-positive B cell enhancer mm9_chr4:40823726-40824026 Neighboring gene STARR-seq mESC enhancer starr_10005 Neighboring gene STARR-seq mESC enhancer starr_10006 Neighboring gene lysine (K)-specific demethylase 2B pseudogene Neighboring gene serine peptidase inhibitor, Kazal type 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      40872419..40900371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001784553.1 RNA Sequence

    2. XR_001784554.1 RNA Sequence

    3. XR_001784552.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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