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    scpl23 serine carboxypeptidase-like 23 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816935, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl23
    Official Full Name
    serine carboxypeptidase-like 23
    Primary source
    TAIR:AT2G24010
    Locus tag
    AT2G24010
    See related
    Araport:AT2G24010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 23; T29E15.21; T29E15_21
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    Genomic context

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    See scpl23 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (10214574..10217739)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene early nodulin-like protein 11 Neighboring gene serine carboxypeptidase-like 22 Neighboring gene Putative BCR, YbaB family COG0718 Neighboring gene zinc ion binding / nucleic acid binding protein Neighboring gene Low temperature and salt responsive protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 23
    NP_001318279.1
    • serine carboxypeptidase-like 23 (scpl23); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3412 Blast hits to 3335 proteins in 258 species: Archae - 0; Bacteria - 12; Metazoa - 650; Fungi - 841; Plants - 1598; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10214574..10217739
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127963.5 → NP_179979.5  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B149

    2. NM_001335912.1 → NP_001318279.1  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4INP1, O82229
      UniProtKB/TrEMBL
      A0A5S9X0L7
      Conserved Domains (1) summary
      pfam00450
      Location:35 → 447
      Peptidase_S10; Serine carboxypeptidase

    3. NM_001335913.1 → NP_001324770.1  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B140

    4. NM_001335914.1 → NP_001324769.1  serine carboxypeptidase-like 23 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B146
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82229.2

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