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    Mannose-binding lectin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842308, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mannose-binding lectin superfamily protein
    Primary source
    TAIR:AT1G60130
    Locus tag
    AT1G60130
    See related
    Araport:AT1G60130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13D8.3; T13D8_3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (22173937..22176343)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene trehalose phosphate synthase Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The proteome landscape of the root cap reveals a role for the jacalin-associated lectin JAL10 in the salt-induced endoplasmic reticulum stress pathway. Das KK, et al. Plant Commun, 2023 Nov 13. PMID 37789617, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to salt stress IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Mannose-binding lectin superfamily protein
    NP_176220.1
    • Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G60110.1); Has 1891 Blast hits to 649 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 1886; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22173937..22176343
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333881.1 → NP_001320730.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANS2, A0A654EK45

    2. NM_104704.2 → NP_176220.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176220.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80737
      UniProtKB/TrEMBL
      A0A654EK45
      Conserved Domains (1) summary
      pfam01419
      Location:465 → 597
      Jacalin; Jacalin-like lectin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80737.1

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