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    RSH3 root hair specific 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838214, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RSH3
    Official Full Name
    root hair specific 3
    Primary source
    TAIR:AT1G16440
    Locus tag
    AT1G16440
    See related
    Araport:AT1G16440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3O9.24; F3O9_24; RHS4; root hair specific 3; ROOT HAIR SPECIFIC 4
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    Genomic context

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    See RSH3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (5615808..5617672)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene metacaspase 8 Neighboring gene Surfeit locus protein 5 subunit 22 of Mediator complex Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene tRNA-Arg

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cis-element- and transcriptome-based screening of root hair-specific genes and their functional characterization in Arabidopsis. Won SK, et al. Plant Physiol, 2009 Jul. PMID 19448035, Free PMC Article
    2. Structural and functional insights into the regulation of Arabidopsis AGC VIIIa kinases. Zegzouti H, et al. J Biol Chem, 2006 Nov 17. PMID 16973627
    3. An IRE-like AGC kinase gene, MtIRE, has unique expression in the invasion zone of developing root nodules in Medicago truncatula. Pislariu CI, et al. Plant Physiol, 2007 Jun. PMID 17237187, Free PMC Article
    4. Growth signalling pathways in Arabidopsis and the AGC protein kinases. Bögre L, et al. Trends Plant Sci, 2003 Sep. PMID 13678909
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101510.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in root hair cell development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    root hair specific 3
    NP_173094.4
    • root hair specific 3 (RSH3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC kinase 1.7 (TAIR:AT1G79250.2); Has 101577 Blast hits to 89577 proteins in 2716 species: Archae - 38; Bacteria - 12727; Metazoa - 39279; Fungi - 11275; Plants - 19035; Viruses - 382; Other Eukaryotes - 18841 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5615808..5617672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101510.6 → NP_173094.4  root hair specific 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173094.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0ME72, F4I4F2, Q1PFV6, Q9SA43
      UniProtKB/TrEMBL
      A0A178WMH2
      Conserved Domains (2) summary
      smart00220
      Location:113 → 436
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd05574
      Location:111 → 457
      STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4I4F2.1

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