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    type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842912, updated on 18-Sep-2024

    Summary

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    Official Full Name
    type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein
    Primary source
    TAIR:AT1G65990
    Locus tag
    AT1G65990
    See related
    Araport:AT1G65990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12P19.16; F12P19_16
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (24571603..24573471, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene thioredoxin-dependent peroxidase 1 Neighboring gene transmembrane protein, putative (DUF247) Neighboring gene hypothetical protein (DUF577) Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables thioredoxin peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein
    NP_176774.1
    • type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Thioredoxin fold (InterPro:IPR012335), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451), Redoxin (InterPro:IPR013740), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G10740.1); Has 5053 Blast hits to 4982 proteins in 889 species: Archae - 6; Bacteria - 1508; Metazoa - 173; Fungi - 295; Plants - 1465; Viruses - 0; Other Eukaryotes - 1606 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24571603..24573471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105271.1 → NP_176774.1  type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176774.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7G959
      UniProtKB/TrEMBL
      A0A178W9X6, A0A5S9WQ65
      Conserved Domains (3) summary
      cd03013
      Location:6 → 140
      PRX5_like; Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol. The cellular location of PRX5 ...
      pfam07734
      Location:366 → 532
      FBA_1; F-box associated
      pfam00646
      Location:158 → 200
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7G959.1

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