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    ADAP ARIA-interacting double AP2 domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838176, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ADAP
    Official Full Name
    ARIA-interacting double AP2 domain protein
    Primary source
    TAIR:AT1G16060
    Locus tag
    AT1G16060
    See related
    Araport:AT1G16060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARIA-interacting double AP2 domain protein; T24D18.16; T24D18_16; WRI3; WRINKLED 3
    Summary
    Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.
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    Genomic context

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    See ADAP in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (5508311..5511736)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene heat shock protein 70B Neighboring gene phosphatidylinositol-glycan biosynthesis class F-like protein Neighboring gene tubby like protein 8 Neighboring gene nuclear protein Neighboring gene wall associated kinase-like 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An ARIA-interacting AP2 domain protein is a novel component of ABA signaling. Lee SJ, et al. Mol Cells, 2009 Apr 30. PMID 19390821
    2. WRINKLED transcription factors orchestrate tissue-specific regulation of fatty acid biosynthesis in Arabidopsis. To A, et al. Plant Cell, 2012 Dec. PMID 23243127, Free PMC Article
    3. The AINTEGUMENTA gene of Arabidopsis required for ovule and female gametophyte development is related to the floral homeotic gene APETALA2. Klucher KM, et al. Plant Cell, 1996 Feb. PMID 8742706, Free PMC Article
    4. Oil biosynthesis in a basal angiosperm: transcriptome analysis of Persea Americana mesocarp. Kilaru A, et al. BMC Plant Biol, 2015 Aug 16. PMID 26276496, Free PMC Article
    5. AINTEGUMENTA promotes petal identity and acts as a negative regulator of AGAMOUS. Krizek BA, et al. Plant Cell, 2000 Aug. PMID 10948255, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001332204.1
    NM_001332205.1
    NM_001332206.1
    NM_001332207.1
    NM_001332208.1
    NM_101474.3
    NM_202110.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of seed germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of cutin biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of fatty acid biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of fatty acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IC
    Inferred by Curator
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ARIA-interacting double AP2 domain protein
    NP_001319016.1
    • ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_563990.1
    • ARIA-interacting double AP2 domain protein (ADAP); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 6422 Blast hits to 4728 proteins in 256 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 6319; Viruses - 2; Other Eukaryotes - 64 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5508311..5511736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101474.3 → NP_563990.1  ARIA-interacting double AP2 domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563990.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EDB4, Q94AN4, Q9S9M9
      UniProtKB/TrEMBL
      A0A5S9UPZ2
      Conserved Domains (2) summary
      cd00018
      Location:159 → 220
      AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
      cl00033
      Location:59 → 130
      AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...

    2. NM_202110.2 → NP_973839.1  ARIA-interacting double AP2 domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973839.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94AN4
      Conserved Domains (1) summary
      cd00018
      Location:89 → 150
      AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...

    3. NM_001332205.1 → NP_001320850.1  ARIA-interacting double AP2 domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W390, A0A1P8AP53, A0A384LJF7

    4. NM_001332204.1 → NP_001319016.1  ARIA-interacting double AP2 domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W390, A0A1P8AP53, A0A384LJF7

    5. NM_001332206.1 → NP_001320849.1  ARIA-interacting double AP2 domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W390, A0A1P8AP53, A0A384LJF7

    6. NM_001332207.1 → NP_001320852.1  ARIA-interacting double AP2 domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W390, A0A1P8AP53, A0A384LJF7

    7. NM_001332208.1 → NP_001320851.1  ARIA-interacting double AP2 domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W455, A0A1P8AP44, A0A384LQ92
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94AN4.1

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