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    RRA2 Nucleotide-diphospho-sugar transferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843848, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RRA2
    Official Full Name
    Nucleotide-diphospho-sugar transferase family protein
    Primary source
    TAIR:AT1G75110
    Locus tag
    AT1G75110
    See related
    Araport:AT1G75110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9E10.4; F9E10_4; REDUCED RESIDUAL ARABINOSE 2
    Summary
    Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells.
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    Genomic context

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    See RRA2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (28194005..28196033, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Brassinosteroid signaling positive regulator (BZR1) family protein Neighboring gene ncRNA Neighboring gene DNA glycosylase superfamily protein Neighboring gene ncRNA Neighboring gene J-domain protein required for chloroplast accumulation response 1 Neighboring gene Nucleotide-diphospho-sugar transferase family protein Neighboring gene plastid transcriptionally active protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization of two Arabidopsis thaliana glycosyltransferase mutants, rra1 and rra2, which have a reduced residual arabinose content in a polymer tightly associated with the cellulosic wall residue. Egelund J, et al. Plant Mol Biol, 2007 Jul. PMID 17401635
    2. O-glycosylated cell wall proteins are essential in root hair growth. Velasquez SM, et al. Science, 2011 Jun 17. PMID 21680836
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. RRA-2 plays a role in the arabinosylation of cell wall components.
      Title: Molecular characterization of two Arabidopsis thaliana glycosyltransferase mutants, rra1 and rra2, which have a reduced residual arabinose content in a polymer tightly associated with the cellulosic wall residue.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_106167.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within root hair cell development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Nucleotide-diphospho-sugar transferase family protein
    NP_565102.1
    • REDUCED RESIDUAL ARABINOSE 2 (RRA2); LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G19360.1); Has 313 Blast hits to 307 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28194005..28196033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106167.3 → NP_565102.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565102.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LCK7, Q9C9Q5
      UniProtKB/TrEMBL
      A0A5S9WUI8, A0A654EZT8
      Conserved Domains (1) summary
      pfam03407
      Location:183 → 405
      Nucleotid_trans; Nucleotide-diphospho-sugar transferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9Q5.1

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