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    MIRO3 MIRO-related GTP-ase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819695, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MIRO3
    Official Full Name
    MIRO-related GTP-ase 3
    Primary source
    TAIR:AT3G05310
    Locus tag
    AT3G05310
    See related
    Araport:AT3G05310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MIRO-related GTP-ase 3; T12H1.28; T12H1_28
    Summary
    Encodes a protein with similarity to MIRO GTPases.
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    Genomic context

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    See MIRO3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (1510160..1513301)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene peroxisomal adenine nucleotide carrier 1 Neighboring gene Cytidine/deoxycytidylate deaminase family protein Neighboring gene O-fucosyltransferase family protein Neighboring gene Cyclin family protein Neighboring gene cyclin family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001337575.1
    NM_001337576.1
    NM_111404.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrion organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    MIRO-related GTP-ase 3
    NP_187182.1
    • MIRO-related GTP-ase 3 (MIRO3); FUNCTIONS IN: GTP binding; INVOLVED IN: mitochondrion transport along microtubule, small GTPase mediated signal transduction; LOCATED IN: mitochondrial outer membrane, intracellular; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), Mitochondrial Rho-like (InterPro:IPR013684), EF hand associated, type-2 (InterPro:IPR013567), Mitochondrial Rho GTPase (InterPro:IPR021181), EF-HAND 2 (InterPro:IPR018249), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 1 (TAIR:AT5G27540.2); Has 1943 Blast hits to 1932 proteins in 256 species: Archae - 0; Bacteria - 18; Metazoa - 950; Fungi - 261; Plants - 517; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1510160..1513301
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111404.1 → NP_187182.1  MIRO-related GTP-ase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187182.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9MA88
      UniProtKB/TrEMBL
      A0A178VHL0
      Conserved Domains (5) summary
      cd01892
      Location:424 → 611
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      COG1100
      Location:426 → 628
      Gem1; GTPase SAR1 family domain [General function prediction only]
      pfam08355
      Location:353 → 418
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 314
      EF_assoc_2; EF hand associated
      cl21455
      Location:13 → 180
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. NM_001337575.1 → NP_001327041.1  MIRO-related GTP-ase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR36

    3. NM_001337576.1 → NP_001327040.1  MIRO-related GTP-ase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR35
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9MA88.1

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