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    PTAC14 plastid transcriptionally active 14 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827759, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PTAC14
    Official Full Name
    plastid transcriptionally active 14
    Primary source
    TAIR:AT4G20130
    Locus tag
    AT4G20130
    See related
    Araport:AT4G20130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1C12.4; plastid transcriptionally active 14; TAC14
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    Genomic context

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    See PTAC14 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (10878817..10882052)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PQ-loop repeat family protein / transmembrane family protein Neighboring gene VACUOLAR SORTING RECEPTOR 7 Neighboring gene tRNA-Thr Neighboring gene Leucine-rich repeat transmembrane protein kinase Neighboring gene excitatory amino acid transporter Neighboring gene golgin family A protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Light and Plastid Signals Regulate Different Sets of Genes in the Albino Mutant Pap7-1. Grübler B, et al. Plant Physiol, 2017 Nov. PMID 28935841, Free PMC Article
    2. A functional component of the transcriptionally active chromosome complex, Arabidopsis pTAC14, interacts with pTAC12/HEMERA and regulates plastid gene expression. Gao ZP, et al. Plant Physiol, 2011 Dec. PMID 22010110, Free PMC Article
    3. Identification of essential subunits in the plastid-encoded RNA polymerase complex reveals building blocks for proper plastid development. Steiner S, et al. Plant Physiol, 2011 Nov. PMID 21949211, Free PMC Article
    4. PAP8/pTAC6 Is Part of a Nuclear Protein Complex and Displays RNA Recognition Motifs of Viral Origin. Chambon L, et al. Int J Mol Sci, 2022 Mar 11. PMID 35328480, Free PMC Article
    5. Arabidopsis Seedling Lethal 1 Interacting With Plastid-Encoded RNA Polymerase Complex Proteins Is Essential for Chloroplast Development. Jiang D, et al. Front Plant Sci, 2020. PMID 33391315, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001341400.1
    NM_001341401.1
    NM_118132.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloroplast organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in plastid transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to cytokinin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to light stimulus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in thylakoid membrane organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast nucleoid HDA PubMed 
    located_in chloroplast thylakoid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of plastid-encoded plastid RNA polymerase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plastid transcriptionally active 14
    NP_193746.3
    • plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10878817..10882052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118132.5 → NP_193746.3  plastid transcriptionally active 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193746.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49439, O49440, Q0WLK1, Q56YC9, Q84JF5
      UniProtKB/TrEMBL
      A0A178V257, A0A5S9XW73
      Conserved Domains (2) summary
      pfam00856
      Location:281 → 324
      SET; SET domain
      pfam09273
      Location:370 → 465
      Rubis-subs-bind; Rubisco LSMT substrate-binding

    2. NM_001341400.1 → NP_001327970.1  plastid transcriptionally active 14 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B373

    3. NM_001341401.1 → NP_001327969.1  plastid transcriptionally active 14 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B373
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84JF5.1

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