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    oligomeric golgi complex subunit-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828587, updated on 18-Sep-2024

    Summary

    Official Full Name
    oligomeric golgi complex subunit-like protein
    Primary source
    TAIR:AT4G24840
    Locus tag
    AT4G24840
    See related
    Araport:AT4G24840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6I7.50; F6I7_50
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (12796247..12801153, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene 26S proteasome regulatory subunit Rpn7 Neighboring gene ncRNA Neighboring gene arginosuccinate synthase family Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene snurportin-1 protein Neighboring gene purple acid phosphatase 24

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_118617.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of exocyst localization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
     
    located_in cytoplasmic vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    located_in plant-type vacuole HDA PubMed 

    General protein information

    Preferred Names
    oligomeric golgi complex subunit-like protein
    NP_567710.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12796247..12801153 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118617.5NP_567710.1  oligomeric golgi complex subunit-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567710.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JRR1, Q9ASS9, Q9SZX4
      UniProtKB/TrEMBL
      A0A178V3Z9, A0A5S9XWH2
      Conserved Domains (2) summary
      pfam06148
      Location:31163
      COG2; COG (conserved oligomeric Golgi) complex component, COG2
      pfam12022
      Location:589718
      DUF3510; Domain of unknown function (DUF3510)