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    transcription repressor OFP15-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824421, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transcription repressor OFP15-like protein
    Primary source
    TAIR:AT3G52550
    Locus tag
    AT3G52550
    See related
    Araport:AT3G52550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3C22.7
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (19492099..19492987, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene phosphoglucan phosphatase Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene ovate family protein 18 Neighboring gene ubiquitin E2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115115.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transcription repressor OFP15-like protein
    NP_190823.1
    • BEST Arabidopsis thaliana protein match is: ovate family protein 18 (TAIR:AT3G52540.1); Has 5496 Blast hits to 1338 proteins in 151 species: Archae - 0; Bacteria - 23; Metazoa - 3754; Fungi - 379; Plants - 301; Viruses - 154; Other Eukaryotes - 885 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19492099..19492987 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115115.3 → NP_190823.1  transcription repressor OFP15-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190823.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6DYC7, Q9SVD6
    Nucleotide Protein
    Heading Accession and Version

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