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    methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830927, updated on 18-Sep-2024

    Summary

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    Official Full Name
    methyltransferase
    Primary source
    TAIR:AT5G10620
    Locus tag
    AT5G10620
    See related
    Araport:AT5G10620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12B17.30; F12B17_30
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (3355006..3356686, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene methyltransferase Neighboring gene cytochrome P450, family 81, subfamily K, polypeptide 2 Neighboring gene cytochrome P450, family 81, subfamily K, polypeptide 1 Neighboring gene flowering-promoting factor-like protein Neighboring gene Translation elongation factor EF1A/initiation factor IF2gamma family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343124.1
    NM_121100.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    methyltransferase
    NP_001318530.1
    • methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10605.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3355006..3356686 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343124.1 → NP_001318530.1  methyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LXB4
      UniProtKB/TrEMBL
      A0A178UA00

    2. NM_121100.3 → NP_196624.1  methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196624.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LXB4
      UniProtKB/TrEMBL
      A0A178UA00
      Conserved Domains (1) summary
      pfam02590
      Location:41 → 192
      SPOUT_MTase; Predicted SPOUT methyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LXB4.1

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