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    Chaperone DnaJ-domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833712, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Chaperone DnaJ-domain superfamily protein
    Primary source
    TAIR:AT5G37380
    Locus tag
    AT5G37380
    See related
    Araport:AT5G37380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNJ8.20; MNJ8_20
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (14816734..14819346, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene LOW protein: ammonium transporter 1-like protein Neighboring gene PRP38 family protein Neighboring gene miscRNA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO. Ichino L, et al. Science, 2021 Jun 3. PMID 34083448, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001085204.2
    NM_001125851.2
    NM_001125852.2
    NM_001344191.1
    NM_001344192.1
    NM_001344193.1
    NM_001344194.1
    NM_123097.5
    NM_180771.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables chromatin binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription corepressor activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Chaperone DnaJ-domain superfamily protein
    NP_001078673.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 20231 Blast hits to 19941 proteins in 3237 species: Archae - 147; Bacteria - 8602; Metazoa - 3333; Fungi - 1703; Plants - 2044; Viruses - 29; Other Eukaryotes - 4373 (source: NCBI BLink).
    NP_001119323.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001318687.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_198554.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_851102.1
    • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 20231 Blast hits to 19941 proteins in 3237 species: Archae - 147; Bacteria - 8602; Metazoa - 3333; Fungi - 1703; Plants - 2044; Viruses - 29; Other Eukaryotes - 4373 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      14816734..14819346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001085204.2 → NP_001078673.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078673.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    2. NM_123097.5 → NP_198554.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198554.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    3. NM_001344193.1 → NP_001332212.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    4. NM_001344191.1 → NP_001318687.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    5. NM_180771.2 → NP_851102.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851102.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    6. NM_001344192.1 → NP_001332211.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    7. NM_001125852.2 → NP_001119324.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119324.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    8. NM_001125851.2 → NP_001119323.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119323.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain

    9. NM_001344194.1 → NP_001332210.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJP7, A0A5S9Y987, Q9FHS7
      Conserved Domains (1) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain
    Nucleotide Protein
    Heading Accession and Version

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