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    TOM3 tobamovirus multiplication protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814749, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TOM3
    Official Full Name
    tobamovirus multiplication protein 3
    Primary source
    TAIR:AT2G02180
    Locus tag
    AT2G02180
    See related
    Araport:AT2G02180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5O4.5; F5O4_5; tobamovirus multiplication protein 3
    Summary
    Necessary for the efficient multiplication of tobamoviruses.
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    Genomic context

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    See TOM3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Sequence:
    Chromosome: 2; NC_003071.7 (560695..563367)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene CCCH-type zinc finger family protein Neighboring gene Remorin family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete inhibition of tobamovirus multiplication by simultaneous mutations in two homologous host genes. Yamanaka T, et al. J Virol, 2002 Mar. PMID 11836427, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_126278.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within viral replication complex formation and maintenance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    tobamovirus multiplication protein 3
    NP_027422.1
    • tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      560695..563367
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126278.3 → NP_027422.1  tobamovirus multiplication protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_027422.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LF52, Q948X6, Q9ZUM2
      UniProtKB/TrEMBL
      A0A178VPK1, A0A5S9WWK0
      Conserved Domains (1) summary
      pfam06454
      Location:31 → 301
      DUF1084; Protein of unknown function (DUF1084)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUM2.2

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