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    Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820100, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pectinacetylesterase family protein
    Primary source
    TAIR:AT3G09410
    Locus tag
    AT3G09410
    See related
    Araport:AT3G09410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (2897638..2901055, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene metallothionein 2A Neighboring gene pol-like 3 Neighboring gene Pectinacetylesterase family protein Neighboring gene peptide transporter family protein Neighboring gene Heat shock protein 70 (Hsp 70) family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_111775.4
    NM_202538.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pectinacetylesterase family protein
    NP_187552.3
    • Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09405.1); Has 557 Blast hits to 548 proteins in 93 species: Archae - 0; Bacteria - 46; Metazoa - 119; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
    NP_974267.2
    • Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09405.1); Has 546 Blast hits to 540 proteins in 92 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 0; Plants - 293; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2897638..2901055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202538.3 → NP_974267.2  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974267.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGD7
      Conserved Domains (1) summary
      pfam03283
      Location:56 → 392
      PAE; Pectinacetylesterase

    2. NM_111775.4 → NP_187552.3  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187552.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IZY1, Q0WTI5, Q9SR22
      UniProtKB/TrEMBL
      A0A178VGD7, A0A5S9XBL8, A0A654F6M3
      Conserved Domains (1) summary
      pfam03283
      Location:56 → 408
      PAE; Pectinacetylesterase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SR22.1

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