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    Tic62 NAD(P)-binding Rossmann-fold superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821422, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Tic62
    Official Full Name
    NAD(P)-binding Rossmann-fold superfamily protein
    Primary source
    TAIR:AT3G18890
    Locus tag
    AT3G18890
    See related
    Araport:AT3G18890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtTic62; translocon at the inner envelope membrane of chloroplasts 62
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    Genomic context

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    See Tic62 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Sequence:
    Chromosome: 3; NC_003074.8 (6510982..6515108)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene ncRNA Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene ncRNA Neighboring gene ternary complex factor MIP1 leucine-zipper protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis tic62 trol mutant lacking thylakoid-bound ferredoxin-NADP+ oxidoreductase shows distinct metabolic phenotype. Lintala M, et al. Mol Plant, 2014 Jan. PMID 24043709
    2. Arabidopsis Tic62 and ferredoxin-NADP(H) oxidoreductase form light-regulated complexes that are integrated into the chloroplast redox poise. Benz JP, et al. Plant Cell, 2009 Dec. PMID 20040542, Free PMC Article
    3. Transcriptional control of photosynthesis genes: the evolutionarily conserved regulatory mechanism in plastid genome function. Puthiyaveetil S, et al. Genome Biol Evol, 2010. PMID 21071627, Free PMC Article
    4. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131
    5. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. tic62 trol mutant lacking thylakoid-bound ferredoxin-NADP+ oxidoreductase shows distinct metabolic phenotype
      Title: Arabidopsis tic62 trol mutant lacking thylakoid-bound ferredoxin-NADP+ oxidoreductase shows distinct metabolic phenotype.
    2. Tic62 represents a major FNR interaction partner not only at the envelope and in the stroma, but also at the thylakoid membranes, thereby acting in light dependent regulation of the allocation of FNR between stroma and chloroplast membranes. [Tic62]
      Title: Arabidopsis Tic62 and ferredoxin-NADP(H) oxidoreductase form light-regulated complexes that are integrated into the chloroplast redox poise.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_112775.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast thylakoid HDA PubMed 
    located_in chloroplast thylakoid membrane HDA PubMed 
    part_of chloroplast thylakoid membrane protein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    NAD(P)-binding Rossmann-fold superfamily protein
    NP_188519.2
    • NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 26348 Blast hits to 17063 proteins in 1661 species: Archae - 97; Bacteria - 5228; Metazoa - 9723; Fungi - 4680; Plants - 1695; Viruses - 652; Other Eukaryotes - 4273 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6510982..6515108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112775.4 → NP_188519.2  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188519.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H0U5, Q9LHN0
      UniProtKB/TrEMBL
      A0A654F8I7
      Conserved Domains (2) summary
      PLN03209
      Location:1 → 639
      PLN03209; translocon at the inner envelope of chloroplast subunit 62; Provisional
      cd05243
      Location:84 → 312
      SDR_a5; atypical (a) SDRs, subgroup 5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8H0U5.1

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