U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MFDX1 mitochondrial ferredoxin 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825895, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MFDX1
    Official Full Name
    mitochondrial ferredoxin 1
    Primary source
    TAIR:AT4G05450
    Locus tag
    AT4G05450
    See related
    Araport:AT4G05450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS MITOCHONDRIAL FERREDOXIN 1; ATMFDX1; C6L9.130; C6L9_130; mitochondrial ferredoxin 1
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MFDX1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (2758643..2760912)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Carbohydrate-binding X8 domain superfamily protein Neighboring gene temperature sensing protein-like protein Neighboring gene RNI-like superfamily protein Neighboring gene RNI-like superfamily protein Neighboring gene RNI-like superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Arabidopsis Iron-Sulfur (Fe-S) Cluster Gene MFDX1 Plays a Role in Host and Nonhost Disease Resistance by Accumulation of Defense-Related Metabolites. Fonseca JP, et al. Int J Mol Sci, 2021 Jul 1. PMID 34281196, Free PMC Article
    2. Identification and molecular characterization of mitochondrial ferredoxins and ferredoxin reductase from Arabidopsis. Takubo K, et al. Plant Mol Biol, 2003 Jul. PMID 13677469
    3. A collection of Ds insertional mutants associated with defects in male gametophyte development and function in Arabidopsis thaliana. Boavida LC, et al. Genetics, 2009 Apr. PMID 19237690, Free PMC Article
    4. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The Arabidopsis Iron-Sulfur (Fe-S) Cluster Gene MFDX1 Plays a Role in Host and Nonhost Disease Resistance by Accumulation of Defense-Related Metabolites.
      Title: The Arabidopsis Iron-Sulfur (Fe-S) Cluster Gene MFDX1 Plays a Role in Host and Nonhost Disease Resistance by Accumulation of Defense-Related Metabolites.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_001340554.1
    NM_116784.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in P450-containing electron transport chain IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in electron transport chain IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    mitochondrial ferredoxin 1
    NP_192454.1
    • mitochondrial ferredoxin 1 (MFDX1); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: pollen tube development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Adrenodoxin (InterPro:IPR001055), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Adrenodoxin, iron-sulphur binding site (InterPro:IPR018298); BEST Arabidopsis thaliana protein match is: MITOCHONDRIAL FERREDOXIN 2 (TAIR:AT4G21090.3); Has 4425 Blast hits to 4425 proteins in 1188 species: Archae - 2; Bacteria - 2167; Metazoa - 246; Fungi - 135; Plants - 85; Viruses - 0; Other Eukaryotes - 1790 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      2758643..2760912
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116784.4 → NP_192454.1  mitochondrial ferredoxin 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192454.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDZ8, Q9M0V0
      UniProtKB/TrEMBL
      A0A178USA6, A0A5S9XPZ7
      Conserved Domains (1) summary
      PLN02593
      Location:81 → 197
      PLN02593; adrenodoxin-like ferredoxin protein

    2. NM_001340554.1 → NP_001329852.1  mitochondrial ferredoxin 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDZ8, Q9M0V0
      UniProtKB/TrEMBL
      A0A178USA6, A0A5S9XPZ7
      Conserved Domains (1) summary
      PLN02593
      Location:81 → 197
      PLN02593; adrenodoxin-like ferredoxin protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M0V0.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools