GGP1 Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: GGP1
Official Full Name: Class I glutamine amidotransferase-like superfamily protein
Primary source: TAIR:AT4G30530
Locus tag: AT4G30530
See related: Araport:AT4G30530
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F17I23.130; F17I23_130; gamma-glutamyl peptidase 1
Summary: Encodes a gamma-glutamyl peptidase, outside the GGT family, that can hydrolyze gamma-glutamyl peptide bonds.
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Genomic context

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See GGP1 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 3

Sequence:: Chromosome: 4; NC_003075.7 (14920376..14922519)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_119199.5

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables gamma-glutamyl-peptidase activity	IDA Inferred from Direct Assay more info	PubMed
enables peptidase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within camalexin biosynthetic process	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within glucosinolate metabolic process	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within glucosinolate metabolic process	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	ISM Inferred from Sequence Model more info
located_in cytoplasmic stress granule	IDA Inferred from Direct Assay more info	PubMed
located_in cytosol	IDA Inferred from Direct Assay more info	PubMed
located_in plasma membrane	HDA more info	PubMed
located_in secretory vesicle	HDA more info	PubMed

General protein information

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Preferred Names: Class I glutamine amidotransferase-like superfamily protein

NP_194782.1

Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G23960.1); Has 6062 Blast hits to 6062 proteins in 1405 species: Archae - 320; Bacteria - 2958; Metazoa - 7; Fungi - 211; Plants - 100; Viruses - 3; Other Eukaryotes - 2463 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

14920376..14922519

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_119199.5 → NP_194782.1 Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_194782.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q8LAM4, Q9M0A7

UniProtKB/TrEMBL

A0A178V143, A0A5S9XXB1

Conserved Domains (1) summary

cd01741
Location:35 → 194

GATase1_1; Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain