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    3-oxo-5-alpha-steroid 4-dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823497, updated on 18-Sep-2024

    Summary

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    Official Full Name
    3-oxo-5-alpha-steroid 4-dehydrogenase family protein
    Primary source
    TAIR:AT3G43840
    Locus tag
    AT3G43840
    See related
    Araport:AT3G43840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (15700352..15701843)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene reverse transcriptase-like protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene glycosyl hydrolase 9A4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables polyprenol reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    3-oxo-5-alpha-steroid 4-dehydrogenase family protein
    NP_001319677.1
    • 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system, integral to membrane, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT2G16530.2); Has 145 Blast hits to 145 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      15700352..15701843
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339111.1 → NP_001319677.1  3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XHK1, Q9LZG4

    2. NM_114252.2 → NP_189970.1  3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189970.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XHK1, Q9LZG4
      Conserved Domains (1) summary
      cl21511
      Location:39 → 84
      PEMT; Phospholipid methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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