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    Cand3 tobamovirus multiplication protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825078, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Cand3
    Official Full Name
    tobamovirus multiplication protein
    Primary source
    TAIR:AT3G59090
    Locus tag
    AT3G59090
    See related
    Araport:AT3G59090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    candidate G-protein Coupled Receptor 3
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    Genomic context

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    See Cand3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (21839143..21842781)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene glucan synthase-like 11 Neighboring gene Protein kinase superfamily protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001035815.1
    NM_001339949.1
    NM_115771.4
    NM_180388.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    tobamovirus multiplication protein
    NP_001030892.1
    • LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567077.1
    • CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 198 Blast hits to 197 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 190; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    NP_850719.1
    • CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21839143..21842781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180388.3 → NP_850719.1  tobamovirus multiplication protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850719.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VC02, A0A384KUF4, A0A7G2ETZ6, B9DFZ1
      Conserved Domains (1) summary
      pfam06454
      Location:23 → 319
      DUF1084; Protein of unknown function (DUF1084)

    2. NM_001339949.1 → NP_001325460.1  tobamovirus multiplication protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LLB0, A0A7G2ETZ6
      Conserved Domains (1) summary
      pfam06454
      Location:114 → 257
      DUF1084; Protein of unknown function (DUF1084)

    3. NM_115771.4 → NP_567077.1  tobamovirus multiplication protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567077.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XNW5, A0A654FJ47, Q945Q2
      Conserved Domains (1) summary
      pfam06454
      Location:23 → 319
      DUF1084; Protein of unknown function (DUF1084)

    4. NM_001035815.1 → NP_001030892.1  tobamovirus multiplication protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030892.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2ETZ6, B9DGA1
      Conserved Domains (1) summary
      pfam06454
      Location:27 → 313
      DUF1084; Protein of unknown function (DUF1084)
    Nucleotide Protein
    Heading Accession and Version

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