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    portal protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834884, updated on 18-Sep-2024

    Summary

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    Official Full Name
    portal protein
    Primary source
    TAIR:AT5G48310
    Locus tag
    AT5G48310
    See related
    Araport:AT5G48310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K23F3.3; K23F3_3
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    20
    Sequence:
    Chromosome: 5; NC_003076.8 (19574780..19580469, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene ADP glucose pyrophosphorylase 1 Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene Regulator of chromosome condensation (RCC1) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of Arabidopsis thaliana RASD1 gene in ABA-dependent abiotic stress response. Podia V, et al. Plant Biol (Stuttg), 2018 Mar. PMID 29125669
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124206.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to abiotic stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    colocalizes_with nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    colocalizes_with plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    portal protein
    NP_001190489.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1).
    NP_199642.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19574780..19580469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203560.2 → NP_001190489.1  portal protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190489.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YED7, F4K1M6

    2. NM_124206.2 → NP_199642.1  portal protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199642.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YED7, Q9LK83
    Nucleotide Protein
    Heading Accession and Version

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