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    lysine ketoglutarate reductase trans-splicing protein (DUF707) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843111, updated on 18-Sep-2024

    Summary

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    Official Full Name
    lysine ketoglutarate reductase trans-splicing protein (DUF707)
    Primary source
    TAIR:AT1G67850
    Locus tag
    AT1G67850
    See related
    Araport:AT1G67850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12A21.2; F12A21_2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    15
    Sequence:
    Chromosome: 1; NC_003070.9 (25437900..25442221)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Protein phosphatase 2C family protein Neighboring gene alpha-fucosidase 1 Neighboring gene chloroplast sensor kinase Neighboring gene uncharacterized protein Neighboring gene RING/U-box superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334328.1
    NM_001334329.1
    NM_001334330.1
    NM_001334331.1
    NM_001334332.1
    NM_105453.3
    NM_202373.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    lysine ketoglutarate reductase trans-splicing protein (DUF707)
    NP_564909.1
    • Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 324 Blast hits to 323 proteins in 26 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    NP_974102.1
    • Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25437900..25442221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105453.3 → NP_564909.1  lysine ketoglutarate reductase trans-splicing protein (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564909.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8Z6, A0A384K8N8, Q94F37
      Conserved Domains (1) summary
      pfam05212
      Location:98 → 386
      DUF707; Protein of unknown function (DUF707)

    2. NM_001334328.1 → NP_001320374.1  lysine ketoglutarate reductase trans-splicing protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8Z6, A0A384K8N8, Q94F37
      Conserved Domains (1) summary
      pfam05212
      Location:98 → 386
      DUF707; Protein of unknown function (DUF707)

    3. NM_202373.4 → NP_974102.1  lysine ketoglutarate reductase trans-splicing protein (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974102.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8Z6, A0A384K8N8, Q94F37
      Conserved Domains (1) summary
      pfam05212
      Location:98 → 386
      DUF707; Protein of unknown function (DUF707)

    4. NM_001334330.1 → NP_001320373.1  lysine ketoglutarate reductase trans-splicing protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8Z6, A0A384K8N8, Q94F37
      Conserved Domains (1) summary
      pfam05212
      Location:98 → 386
      DUF707; Protein of unknown function (DUF707)

    5. NM_001334329.1 → NP_001320375.1  lysine ketoglutarate reductase trans-splicing protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AMP7, A0A654ENL9

    6. NM_001334331.1 → NP_001320376.1  lysine ketoglutarate reductase trans-splicing protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8Z6, A0A384K8N8, Q94F37
      Conserved Domains (1) summary
      pfam05212
      Location:98 → 386
      DUF707; Protein of unknown function (DUF707)

    7. NM_001334332.1 → NP_001320377.1  lysine ketoglutarate reductase trans-splicing protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8Z6, A0A384K8N8, Q94F37
      Conserved Domains (1) summary
      pfam05212
      Location:98 → 386
      DUF707; Protein of unknown function (DUF707)
    Nucleotide Protein
    Heading Accession and Version

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