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    Fbxo33 F-box protein 33 [ Mus musculus (house mouse) ]

    Gene ID: 70611, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fbxo33provided by MGI
    Official Full Name
    F-box protein 33provided by MGI
    Primary source
    MGI:MGI:1917861
    See related
    Ensembl:ENSMUSG00000035329 AllianceGenome:MGI:1917861
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    5730501N20Rik
    Summary
    Predicted to be involved in positive regulation of protein ubiquitination. Is expressed in embryo. Orthologous to human FBXO33 (F-box protein 33). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 5.4), cortex adult (RPKM 5.3) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fbxo33 in Genome Data Viewer
    Location:
    12 C1; 12 26.03 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (59247441..59268747, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (59200655..59221961, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L21, pseudogene 3 Neighboring gene MIA SH3 domain ER export factor 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:60226425-60226608 Neighboring gene predicted gene, 24233 Neighboring gene STARR-seq mESC enhancer starr_32245 Neighboring gene STARR-positive B cell enhancer ABC_E9040 Neighboring gene STARR-positive B cell enhancer ABC_E7137 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene Smad nuclear interacting protein 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in positive regulation of protein ubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    F-box only protein 33
    Names
    AIG30-12-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033156.4NP_001028328.2  F-box only protein 33

      See identical proteins and their annotated locations for NP_001028328.2

      Status: VALIDATED

      Source sequence(s)
      AC147101
      Consensus CDS
      CCDS49072.1
      UniProtKB/Swiss-Prot
      A0JLR4, E9QMJ3, Q8VE08
      Related
      ENSMUSP00000035948.8, ENSMUST00000043204.8
      Conserved Domains (1) summary
      cd22104
      Location:71118
      F-box_FBXO33; F-box domain found in F-box only protein 33 (FBXO33) and similar proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      59247441..59268747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017315183.2XP_017170672.1  F-box only protein 33 isoform X1

      Conserved Domains (1) summary
      pfam12937
      Location:242281
      F-box-like