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    bromodomain protein (DUF761) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817151, updated on 18-Sep-2024

    Summary

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    Official Full Name
    bromodomain protein (DUF761)
    Primary source
    TAIR:AT2G26110
    Locus tag
    AT2G26110
    See related
    Araport:AT2G26110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T19L18.8; T19L18_8
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (11120523..11122146)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene Galactosyltransferase family protein Neighboring gene glycine-rich protein Neighboring gene RING/U-box protein with C6HC-type zinc finger

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_128169.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    bromodomain protein (DUF761)
    NP_180180.3
    • Protein of unknown function (DUF761); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11120523..11122146
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128169.5 → NP_180180.3  bromodomain protein (DUF761) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180180.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      O80986, Q67XS0
      Conserved Domains (2) summary
      pfam05553
      Location:270 → 304
      DUF761; Cotton fibre expressed protein
      pfam14364
      Location:40 → 67
      DUF4408; Domain of unknown function (DUF4408)
    Nucleotide Protein
    Heading Accession and Version

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