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    Avr9/Cf-9 rapidly elicited protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841644, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Avr9/Cf-9 rapidly elicited protein
    Primary source
    TAIR:AT1G52140
    Locus tag
    AT1G52140
    See related
    Araport:AT1G52140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5F19.20; F5F19_20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (19407259..19408319, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_104095.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Avr9/Cf-9 rapidly elicited protein
    NP_564601.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19407259..19408319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104095.3 → NP_564601.1  Avr9/Cf-9 rapidly elicited protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564601.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WNX9, Q8LCJ4, Q9ZU12
    Nucleotide Protein
    Heading Accession and Version

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