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    RNS3 ribonuclease 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839225, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RNS3
    Official Full Name
    ribonuclease 3
    Primary source
    TAIR:AT1G26820
    Locus tag
    AT1G26820
    See related
    Araport:AT1G26820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ribonuclease 3; RIBONUCLEASE 3; T24P13.23
    Summary
    Encodes ribonuclease RNS3.
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    Genomic context

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    See RNS3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (9292446..9293862, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene FBD domain family Neighboring gene ncRNA Neighboring gene cullin 3 Neighboring gene origin recognition complex protein 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102446.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ribonuclease T2 activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ribonuclease 3
    NP_564264.1
    • ribonuclease 3 (RNS3); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2544 Blast hits to 2543 proteins in 498 species: Archae - 0; Bacteria - 415; Metazoa - 284; Fungi - 227; Plants - 1506; Viruses - 7; Other Eukaryotes - 105 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9292446..9293862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102446.3 → NP_564264.1  ribonuclease 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564264.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42815
      UniProtKB/TrEMBL
      A0A178W614, A0A5S9W2J3
      Conserved Domains (1) summary
      pfam00445
      Location:22 → 205
      Ribonuclease_T2; Ribonuclease T2 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42815.1

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