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    Scorpion toxin-like knottin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818955, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Scorpion toxin-like knottin superfamily protein
    Primary source
    TAIR:AT2G43535
    Locus tag
    AT2G43535
    See related
    Araport:AT2G43535
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes a defensin-like (DEFL) family protein.
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (18070960..18071826)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene trypsin inhibitor protein 2 Neighboring gene scorpion toxin-like knottin superfamily protein Neighboring gene uncharacterized protein Neighboring gene scorpion toxin-like knottin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_129915.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sodium channel inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in secretory vesicle HDA PubMed 

    General protein information

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    Preferred Names
    Scorpion toxin-like knottin superfamily protein
    NP_566000.1
    • Scorpion toxin-like knottin superfamily protein; FUNCTIONS IN: ion channel inhibitor activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Scorpion long chain toxin (InterPro:IPR002061), Knottin (InterPro:IPR003614); BEST Arabidopsis thaliana protein match is: Scorpion toxin-like knottin superfamily protein (TAIR:AT1G47540.1); Has 146 Blast hits to 146 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18070960..18071826
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129915.4 → NP_566000.1  Scorpion toxin-like knottin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566000.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6ZZS3, Q8RYE7
      UniProtKB/TrEMBL
      A0A178VV23
      Conserved Domains (1) summary
      pfam00537
      Location:29 → 89
      Toxin_3; Scorpion toxin-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RYE7.1

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