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    Phosphoribulokinase / Uridine kinase family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843736, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Phosphoribulokinase / Uridine kinase family
    Primary source
    TAIR:AT1G73980
    Locus tag
    AT1G73980
    See related
    Araport:AT1G73980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtTTM1; F2P9.15; F2P9_15; triphosphate tunnel metalloenzyme 1; TTM1
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (27820060..27824127, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene TBP-associated factor 2 Neighboring gene obscurin-like protein Neighboring gene CLAVATA3/ESR-RELATED 13 Neighboring gene signal peptide peptidase Neighboring gene strictosidine synthase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple phosphorylation events of the mitochondrial membrane protein TTM1 regulate cell death during senescence. Karia P, et al. Plant J, 2021 Nov. PMID 34409658
    2. Triphosphate Tunnel Metalloenzyme Function in Senescence Highlights a Biological Diversification of This Protein Superfamily. Ung H, et al. Plant Physiol, 2017 Sep. PMID 28733390, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_001334620.1
    NM_001334621.1
    NM_106057.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables inorganic diphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pyrophosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of leaf senescence IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Phosphoribulokinase / Uridine kinase family
    NP_177538.1
    • Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 4488 Blast hits to 4465 proteins in 1702 species: Archae - 37; Bacteria - 3307; Metazoa - 347; Fungi - 118; Plants - 328; Viruses - 2; Other Eukaryotes - 349 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27820060..27824127 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106057.3 → NP_177538.1  Phosphoribulokinase / Uridine kinase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177538.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9B9
      UniProtKB/TrEMBL
      A0A178WJA2, A0A5S9WU61
      Conserved Domains (1) summary
      PLN02318
      Location:1 → 643
      PLN02318; phosphoribulokinase/uridine kinase

    2. NM_001334620.1 → NP_001320870.1  Phosphoribulokinase / Uridine kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9B9
      UniProtKB/TrEMBL
      A0A178WJA2, A0A5S9WU61
      Conserved Domains (1) summary
      PLN02318
      Location:1 → 643
      PLN02318; phosphoribulokinase/uridine kinase

    3. NM_001334621.1 → NP_001320871.1  Phosphoribulokinase / Uridine kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9B9
      UniProtKB/TrEMBL
      A0A178WJA2, A0A5S9WU61
      Conserved Domains (1) summary
      PLN02318
      Location:1 → 643
      PLN02318; phosphoribulokinase/uridine kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9B9.1

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