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    Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843792, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Galactose oxidase/kelch repeat superfamily protein
    Primary source
    TAIR:AT1G74510
    Locus tag
    AT1G74510
    See related
    Araport:AT1G74510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1M20.19; F1M20_19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (28005264..28007748)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 Neighboring gene HVA22 homologue A Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular evolution and selection patterns of plant F-box proteins with C-terminal kelch repeats. Schumann N, et al. Plant Physiol, 2011 Feb. PMID 21119043, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001334651.1
    NM_106111.4
    NM_179553.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Galactose oxidase/kelch repeat superfamily protein
    NP_177591.1
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G02870.3); Has 7938 Blast hits to 4441 proteins in 274 species: Archae - 4; Bacteria - 392; Metazoa - 6058; Fungi - 35; Plants - 1067; Viruses - 39; Other Eukaryotes - 343 (source: NCBI BLink).
    NP_849884.1
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G02870.3); Has 7938 Blast hits to 4441 proteins in 274 species: Archae - 4; Bacteria - 392; Metazoa - 6058; Fungi - 35; Plants - 1067; Viruses - 39; Other Eukaryotes - 343 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28005264..28007748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106111.4 → NP_177591.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177591.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CA63
      UniProtKB/TrEMBL
      A0A178WJ20, A0A5S9WUB9
      Conserved Domains (2) summary
      PHA03098
      Location:226 → 407
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:226 → 271
      Kelch; KELCH repeat [structural motif]

    2. NM_179553.1 → NP_849884.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849884.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CA63
      UniProtKB/TrEMBL
      A0A178WJ20, A0A5S9WUB9
      Conserved Domains (2) summary
      PHA03098
      Location:226 → 407
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:226 → 271
      Kelch; KELCH repeat [structural motif]

    3. NM_001334651.1 → NP_001321513.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CA63
      UniProtKB/TrEMBL
      A0A178WJ20, A0A5S9WUB9
      Conserved Domains (2) summary
      PHA03098
      Location:226 → 407
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:226 → 271
      Kelch; KELCH repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CA63.1

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