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    Fatty acid hydroxylase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820687, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Fatty acid hydroxylase superfamily protein
    Primary source
    TAIR:AT3G02590
    Locus tag
    AT3G02590
    See related
    Araport:AT3G02590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16B3.22; F16B3_22
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (549175..550682)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S7e family protein Neighboring gene Mannose-6-phosphate isomerase, type I Neighboring gene sterol 1 Neighboring gene lipid phosphate phosphatase 3 Neighboring gene plant stearoyl-acyl-carrier desaturase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables delta7-sterol 5(6)-desaturase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Fatty acid hydroxylase superfamily protein
    NP_186908.1
    • Fatty acid hydroxylase superfamily protein; FUNCTIONS IN: oxidoreductase activity, C-5 sterol desaturase activity, iron ion binding; INVOLVED IN: oxidation reduction, sterol biosynthetic process, fatty acid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 1 (TAIR:AT3G02580.1); Has 2431 Blast hits to 2426 proteins in 433 species: Archae - 0; Bacteria - 540; Metazoa - 353; Fungi - 499; Plants - 398; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      549175..550682
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111127.2 → NP_186908.1  Fatty acid hydroxylase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186908.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M883
      UniProtKB/TrEMBL
      A0A178V9Y3, A0A5S9X8K4, A0A7G2EIE6
      Conserved Domains (1) summary
      pfam04116
      Location:133 → 263
      FA_hydroxylase; Fatty acid hydroxylase superfamily

    2. NM_001337418.1 → NP_001325854.1  Fatty acid hydroxylase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMH5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M883.1

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