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    TTN9 titan9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821546, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TTN9
    Official Full Name
    titan9
    Primary source
    TAIR:AT3G20070
    Locus tag
    AT3G20070
    See related
    Araport:AT3G20070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    TITAN9
    Summary
    Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information.
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    Genomic context

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    See TTN9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (7004672..7006941, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Hexokinase Neighboring gene T-complex protein 1 alpha subunit Neighboring gene ubiquitin-conjugating enzyme19 Neighboring gene miscRNA Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 15 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diversity of TITAN functions in Arabidopsis seed development. Tzafrir I, et al. Plant Physiol, 2002 Jan. PMID 11788751, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001338448.1
    NM_112898.4
    NM_202613.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within endosperm development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    titan9
    NP_188642.2
    • TITAN9 (TTN9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy, endosperm development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 250 Blast hits to 217 proteins in 63 species: Archae - 0; Bacteria - 52; Metazoa - 53; Fungi - 8; Plants - 43; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink).
    NP_974342.1
    • TITAN9 (TTN9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy, endosperm development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7004672..7006941 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338449.1 → NP_001327503.1  titan9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH61, A0A384LCV3, A0A5S9XDV0, A0A654F8X5, Q9LJZ4

    2. NM_202613.3 → NP_974342.1  titan9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974342.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH61, A0A384LCV3, A0A5S9XDV0, A0A654F8X5, Q9LJZ4

    3. NM_112898.4 → NP_188642.2  titan9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188642.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH61, A0A384LCV3, A0A5S9XDV0, A0A654F8X5, Q9LJZ4

    4. NM_001338448.1 → NP_001327502.1  titan9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LSI5, A0A5S9XDV0, A0A654F8X5
    Nucleotide Protein
    Heading Accession and Version

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