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    mRNA capping enzyme family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821612, updated on 18-Sep-2024

    Summary

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    Official Full Name
    mRNA capping enzyme family protein
    Primary source
    TAIR:AT3G20650
    Locus tag
    AT3G20650
    See related
    Araport:AT3G20650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (7220733..7224090, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ubiquitin-specific protease 14 Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene tRNA-Arg Neighboring gene organic cation/carnitine transporter4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nuclear targeting of methyl-recycling enzymes in Arabidopsis thaliana is mediated by specific protein interactions. Lee S, et al. Mol Plant, 2012 Jan. PMID 21976714
    2. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The nuclear targeting of ADK1 and SAHH1 is mediated by their interaction with cap MT.
      Title: Nuclear targeting of methyl-recycling enzymes in Arabidopsis thaliana is mediated by specific protein interactions.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001338490.1
    NM_112956.6
    NM_202617.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA 5'-cap (guanine-N7-)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    mRNA capping enzyme family protein
    NP_188701.2
    • mRNA capping enzyme family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: mRNA capping; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: mRNA (guanine-N(7))-methyltransferase (InterPro:IPR016899), mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G52210.1); Has 916 Blast hits to 903 proteins in 291 species: Archae - 0; Bacteria - 22; Metazoa - 149; Fungi - 179; Plants - 106; Viruses - 144; Other Eukaryotes - 316 (source: NCBI BLink).
    NP_974346.1
    • mRNA capping enzyme family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: mRNA capping; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: mRNA (guanine-N(7))-methyltransferase (InterPro:IPR016899), mRNA capping enzyme, large subunit (InterPro:IPR004971); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G52210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7220733..7224090 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112956.6 → NP_188701.2  mRNA capping enzyme family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188701.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EB33, Q9LHQ7
      UniProtKB/TrEMBL
      A0A178V6P9, A0A5S9XE81, A0A7G2EQN6
      Conserved Domains (1) summary
      pfam03291
      Location:30 → 341
      Pox_MCEL; mRNA capping enzyme

    2. NM_202617.2 → NP_974346.1  mRNA capping enzyme family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974346.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EQN6, F4JER8
      Conserved Domains (1) summary
      pfam03291
      Location:30 → 340
      Pox_MCEL; mRNA capping enzyme

    3. NM_001338490.1 → NP_001326771.1  mRNA capping enzyme family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQA7, A0A7G2EQN6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LHQ7.1

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