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    FGGY family of carbohydrate kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829154, updated on 18-Sep-2024

    Summary

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    Official Full Name
    FGGY family of carbohydrate kinase
    Primary source
    TAIR:AT4G30310
    Locus tag
    AT4G30310
    See related
    Araport:AT4G30310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17I23.350; F17I23_350
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    14
    Sequence:
    Chromosome: 4; NC_003075.7 (14831738..14835343)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene xyloglucan endotransglucosylase/hydrolase 19 Neighboring gene non-intrinsic ABC protein 15 Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene Small nuclear ribonucleoprotein family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Redox Conformation-Specific Protein-Protein Interactions of the 2-Cysteine Peroxiredoxin in Arabidopsis. Liebthal M, et al. Antioxidants (Basel), 2020 Jun 11. PMID 32545358, Free PMC Article
    2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119177.5
    NM_179142.1
    NM_179143.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphotransferase activity, alcohol group as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    FGGY family of carbohydrate kinase
    NP_194760.2
    • FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 16218 Blast hits to 14320 proteins in 2322 species: Archae - 199; Bacteria - 12888; Metazoa - 473; Fungi - 341; Plants - 104; Viruses - 0; Other Eukaryotes - 2213 (source: NCBI BLink).
    NP_849473.1
    • FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12553 Blast hits to 11885 proteins in 2113 species: Archae - 169; Bacteria - 10333; Metazoa - 409; Fungi - 243; Plants - 67; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).
    NP_849474.1
    • FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12264 Blast hits to 12262 proteins in 2271 species: Archae - 128; Bacteria - 9718; Metazoa - 437; Fungi - 335; Plants - 71; Viruses - 0; Other Eukaryotes - 1575 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14831738..14835343
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342005.1 → NP_001328910.1  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZT5, A0A1P8B635
      Conserved Domains (1) summary
      cd07782
      Location:1 → 453
      FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases

    2. NM_119177.5 → NP_194760.2  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194760.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZF4, A0A7G2F4Z6, F4JQ90, Q67Y17
      Conserved Domains (1) summary
      cd07782
      Location:15 → 571
      FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases

    3. NM_179142.1 → NP_849473.1  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849473.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FU74, F4JQ91, Q9M0C9
      Conserved Domains (1) summary
      cd07782
      Location:15 → 485
      FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases

    4. NM_179143.1 → NP_849474.1  FGGY family of carbohydrate kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849474.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZT5, F4JQ92
      Conserved Domains (1) summary
      cd07782
      Location:1 → 443
      FGGY_YpCarbK_like; Yersinia Pseudotuberculosis carbohydrate kinase-like subgroup; belongs to the FGGY family of carbohydrate kinases
    Nucleotide Protein
    Heading Accession and Version

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