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    Integrin-linked protein kinase family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825152, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Integrin-linked protein kinase family
    Primary source
    TAIR:AT3G59830
    Locus tag
    AT3G59830
    See related
    Araport:AT3G59830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (22102647..22105441, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene stress response protein Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene LETM1-like protein Neighboring gene allyl alcohol dehydrogenase-like protein Neighboring gene Zinc-binding dehydrogenase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis and experimentation of plant serine/ threonine/tyrosine-specific protein kinases. Rudrabhatla P, et al. Plant Mol Biol, 2006 Jan. PMID 16429265
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115845.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine/tyrosine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Integrin-linked protein kinase family
    NP_191542.2
    • Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT2G43850.1); Has 148950 Blast hits to 121470 proteins in 4033 species: Archae - 166; Bacteria - 14141; Metazoa - 63831; Fungi - 11612; Plants - 31303; Viruses - 594; Other Eukaryotes - 27303 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22102647..22105441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115845.3 → NP_191542.2  Integrin-linked protein kinase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191542.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBD1, A0A654FJB1, F4J9G8, Q9M1Z1
      Conserved Domains (3) summary
      sd00045
      Location:80 → 106
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:80 → 167
      Ank_2; Ankyrin repeats (3 copies)
      cl21453
      Location:202 → 455
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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