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    asparaginyl-tRNA synthetase family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833866, updated on 18-Sep-2024

    Summary

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    Official Full Name
    asparaginyl-tRNA synthetase family
    Primary source
    TAIR:AT5G38750
    Locus tag
    AT5G38750
    See related
    Araport:AT5G38750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MKD10.8; MKD10_8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (15522650..15523180)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Late embryogenesis abundant protein (LEA) family protein Neighboring gene glutamine dumper 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    asparaginyl-tRNA synthetase family
    NP_198691.1
    • asparaginyl-tRNA synthetase family; FUNCTIONS IN: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity; INVOLVED IN: N-terminal protein myristoylation, tRNA aminoacylation for protein translation; EXPRESSED IN: sperm cell; BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT5G56680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15522650..15523180
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123236.1 → NP_198691.1  asparaginyl-tRNA synthetase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198691.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G6D4, F4KBM0
      Conserved Domains (1) summary
      PLN02221
      Location:1 → 127
      PLN02221; asparaginyl-tRNA synthetase
    Nucleotide Protein
    Heading Accession and Version

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