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    CYCP4;2 CYCLIN P4;2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836287, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYCP4;2
    Official Full Name
    CYCLIN P4;2
    Primary source
    TAIR:AT5G61650
    Locus tag
    AT5G61650
    See related
    Araport:AT5G61650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CYCLIN P4;2; CYCP4; K11J9.17; K11J9_17
    Summary
    The P-type cyclins (CYCPs) share a conserved central region of 100 amino acids ('cyclin box') displaying homology to the corresponding region of the PHO80 cyclin from Saccharomyces cerevisiae and the related G1 cyclins from Trypanosoma cruzi and T. brucei.
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    Genomic context

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    See CYCP4;2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (24778191..24779989)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene myb-like transcription factor family protein Neighboring gene uncharacterized protein Neighboring gene peptidemethionine sulfoxide reductase 1 Neighboring gene glycine-rich protein Neighboring gene ncRNA Neighboring gene orange protein Neighboring gene Pectin lyase-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization of Arabidopsis PHO80-like proteins, a novel class of CDKA;1-interacting cyclins. Torres Acosta JA, et al. Cell Mol Life Sci, 2004 Jun. PMID 15197472, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125559.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CYCLIN P4;2
    NP_200973.1
    • CYCLIN P4;2 (CYCP4;2); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p4;3 (TAIR:AT5G07450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24778191..24779989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125559.3 → NP_200973.1  CYCLIN P4;2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200973.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FKF6
      UniProtKB/TrEMBL
      A0A178UA67
      Conserved Domains (1) summary
      cl00050
      Location:34 → 155
      CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FKF6.1

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