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    DAR7 DA1-related protein 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836793, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DAR7
    Official Full Name
    DA1-related protein 7
    Primary source
    TAIR:AT5G66610
    Locus tag
    AT5G66610
    See related
    Araport:AT5G66610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DA1-related protein 7; K1F13.29; K1F13_29
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    Genomic context

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    See DAR7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (26584734..26587976)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene DA1-related protein 6 Neighboring gene DA1-related protein 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NM_001203708.1
    NM_001345787.1
    NM_126059.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ubiquitin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DA1-related protein 7
    NP_001190637.1
    • DA1-related protein 7 (DAR7); FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1).
    NP_201462.2
    • DA1-related protein 7 (DAR7); FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1); Has 2467 Blast hits to 1764 proteins in 148 species: Archae - 0; Bacteria - 16; Metazoa - 1946; Fungi - 65; Plants - 174; Viruses - 2; Other Eukaryotes - 264 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26584734..26587976
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126059.5 → NP_201462.2  DA1-related protein 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201462.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WPA2, Q9FJX9
      UniProtKB/TrEMBL
      A0A5S9YI42
      Conserved Domains (2) summary
      cd09396
      Location:201 → 252
      LIM_DA1; The Lim domain of DA1
      pfam12315
      Location:343 → 553
      DUF3633; Protein of unknown function (DUF3633)

    2. NM_001203708.1 → NP_001190637.1  DA1-related protein 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190637.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YI42, F4K0N7
      Conserved Domains (2) summary
      cd09396
      Location:201 → 252
      LIM_DA1; The Lim domain of DA1
      pfam12315
      Location:343 → 580
      DUF3633; Protein of unknown function (DUF3633)

    3. NM_001345787.1 → NP_001331414.1  DA1-related protein 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BDU0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FJX9.2

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