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    REV7 DNA-binding HORMA family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838228, updated on 18-Sep-2024

    Summary

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    Official Symbol
    REV7
    Official Full Name
    DNA-binding HORMA family protein
    Primary source
    TAIR:AT1G16590
    Locus tag
    AT1G16590
    See related
    Araport:AT1G16590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATREV7; F19K19.10; F19K19_10
    Summary
    putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).
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    Genomic context

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    See REV7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (5673707..5675143)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Per1-like family protein Neighboring gene ncRNA Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene miscRNA Neighboring gene arginine/serine-rich 45

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Roles of Arabidopsis AtREV1 and AtREV7 in translesion synthesis. Takahashi S, et al. Plant Physiol, 2005 Jun. PMID 15908599, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001332237.1
    NM_101522.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to UV-B IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNA-binding HORMA family protein
    NP_564002.1
    • REV7; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); Has 307 Blast hits to 307 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 86; Plants - 49; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5673707..5675143
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101522.4 → NP_564002.1  DNA-binding HORMA family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564002.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94FL5, Q9FX75
      UniProtKB/TrEMBL
      A0A178W5B3
      Conserved Domains (1) summary
      pfam02301
      Location:19 → 111
      HORMA; HORMA domain

    2. NM_001332237.1 → NP_001321915.1  DNA-binding HORMA family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5B3, A0A1P8ASH7, A0A5S9UPU1, A0A654EAG4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94FL5.1

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